Clusterscan Report

Clusterscan Report: Fields

Name	Data Type
Sample	str
Branches	dict[str, str]
Reference	str
Region	str
Coordinates of domains (end5, end3)	list[list[int]]
Best number of clusters for each domain	list[int]
Original filterscan domains (end5, end3) comprising each final domain	list
Time began	str
Time ended	str
Time taken (minutes)	float
Version of SEISMIC-RNA	str

Clusterscan Report: Example

{
    "Sample": "sample1",
    "Branches": {
        "idmut": "",
        "clusterscan": ""
    },
    "Reference": "myref",
    "Region": "full",
    "Coordinates of domains (end5, end3)": [
        [3, 56],
        [124, 174]
    ],
    "Best number of clusters for each domain": [
        2,
        2
    ],
    "Original filterscan domains (end5, end3) comprising each final domain": [
        [
            [3, 56]
        ],
        [
            [124, 174]
        ]
    ],
    "Time began": "2026-07-02 at 10:07:48",
    "Time ended": "2026-07-02 at 10:14:39",
    "Time taken (minutes)": 6.85,
    "Version of SEISMIC-RNA": "0.26.0dev"
}