Clusterscan Report

Clusterscan Report: Fields

Name	Data Type
Sample	str
Branches	dict[str, str]
Reference	str
Region	str
Best number of clusters for each domain, keyed by domain coordinates (end5, end3)	dict[str, int]
Filterscan domains (end5, end3) merged into each final domain, keyed by the final domain (end5, end3); omits domains that were not merged	dict[str, list]
Time began	str
Time ended	str
Time taken (minutes)	float
Version of SEISMIC-RNA	str

Clusterscan Report: Example

{
    "Sample": "sample1",
    "Branches": {
        "idmut": "",
        "clusterscan": ""
    },
    "Reference": "myref",
    "Region": "full",
    "Best number of clusters for each domain, keyed by domain coordinates (end5, end3)": {
        "3,56": 2,
        "124,230": 3
    },
    "Filterscan domains (end5, end3) merged into each final domain, keyed by the final domain (end5, end3); omits domains that were not merged": {
        "124,230": [
            [124, 174],
            [175, 230]
        ]
    },
    "Time began": "2026-07-02 at 10:07:48",
    "Time ended": "2026-07-02 at 10:14:39",
    "Time taken (minutes)": 6.85,
    "Version of SEISMIC-RNA": "0.26.0dev"
}