Fold Report

Fold Report: Fields

Name

Data Type

Name of Sample

str

Name of Reference

str

Name of Region

str

Name of Profile

str

Quantile for normalizing ratios; must be in [0, 1]

float

Temperature at which to predict structures (in Kelvin)

float

Maximum distance between two paired bases in predicted structures (use 0 for no limit)

int

Predict only the minimum free energy (MFE) structure, without any suboptimal structures

bool

Maximum number of predicted structures

int

Maximum % difference in energy between suboptimal structures

float

Branches

list[str]

Time Began

str

Time Ended

str

Time Taken (minutes)

float

Version of SEISMIC-RNA

str

Fold Report: Example

{
    "Name of Sample": "ldi",
    "Name of Reference": "sars2_1799",
    "Name of Region": "third",
    "Name of Profile": "fse__average",
    "Quantile for normalizing ratios; must be in [0, 1]": 0.95,
    "Temperature at which to predict structures (in Kelvin)": 310.15,
    "Maximum distance between two paired bases in predicted structures (use 0 for no limit)": 0,
    "Predict only the minimum free energy (MFE) structure, without any suboptimal structures": false,
    "Maximum number of predicted structures": 20,
    "Maximum % difference in energy between suboptimal structures": 20.0,
    "Branches": [],
    "Time Began": "2023-12-29 at 22:10:46",
    "Time Ended": "2023-12-29 at 22:10:53",
    "Time Taken (minutes)": 0.12,
    "Version of SEISMIC-RNA": "0.10.0"
}