Read Names Batch
Each batch of relation vectors is a QnamesBatchIO object.
Read names batch: Structure
The read names are in the attribute names, a numpy.ndarray with
data type str.
The name of the read with number i (see Relate batch: Structure of read numbers for
more information) is at index i of the names array.
Read names batch: Example
Suppose a XAM file contains five reads:
Read Number |
Read Name |
|---|---|
0 |
|
1 |
|
2 |
|
3 |
|
4 |
|
The relate step would write a batch with the names attribute
["VL00355:66:AACYHM7M5:1:2106:54095:30496",
"VL00355:66:AACYHM7M5:1:2303:34554:55259",
"VL00355:66:AACYHM7M5:1:2411:30558:38352",
"VL00355:66:AACYHM7M5:1:1206:41825:52949",
"VL00355:66:AACYHM7M5:1:2506:10903:12605"]
Note that the attribute is shown as a list for visual simplicity,
but would really be a numpy.ndarray.