Metadata for Samples ------------------------------------------------------------------------ About metadata for samples ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Purpose of metadata for samples """""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""" Define metadata about samples, such as the cell line or buffer in which the RNA was probed, the type and concentration of the chemical probe, and the temperature during chemical probing. Fields of metadata for samples ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ============= ===== ================================================================ ======== Name Type Description Required ============= ===== ================================================================ ======== Sample str Name of the sample yes ... n/a Additional metadata of the sample no ============= ===== ================================================================ ======== Notes about metadata for samples """""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""" - Fields are case-sensitive and must be in the file's first line. - Additional fields with arbitrary names can be given. Their data types will be inferred as strings, integers, or floats. Example metadata for samples ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Example metadata for samples as a pretty table """""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""" ====== ==== ========== ========= ========================== ===== ============= =========== ======== === Sample User Date Condition System Probe Concentration Temperature Duration ASO ====== ==== ========== ========= ========================== ===== ============= =========== ======== === noaso Hui 2023-09-19 in vitro sodium cacodylate (300 mM) DMS 10.5 310 240 0 aso1 Hui 2023-09-19 in vitro sodium cacodylate (300 mM) DMS 10.5 310 240 1 aso2 Hui 2023-09-19 in vitro sodium cacodylate (300 mM) DMS 10.5 310 240 2 ut Hui 2023-09-19 in vitro sodium cacodylate (300 mM) DMS 0.0 310 240 0 ====== ==== ========== ========= ========================== ===== ============= =========== ======== === Example metadata for samples as plain text """""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""" :: Sample,User,Date,Condition,System,Probe,Concentration,Temperature,Duration,ASO noaso,Hui,2023-09-19,in vitro,sodium cacodylate (300 mM),DMS,10.5,310,240,0 aso1,Hui,2023-09-19,in vitro,sodium cacodylate (300 mM),DMS,10.5,310,240,1 aso2,Hui,2023-09-19,in vitro,sodium cacodylate (300 mM),DMS,10.5,310,240,2 ut,Hui,2023-09-19,in vitro,sodium cacodylate (300 mM),DMS,0,310,240,0 This text can be copied into a new CSV file.